rs38868611 SNP Detail

Summary

• ID
  rs38868611
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108728847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAAAAAAAG GAAACTTACT ATTTTATACA ATTACTGACA
  AAAGGTTTGG TGAAAAATTA TTGTTGTCTG CCCTAGGTTT TGTCATTCAG TGTTTGGAAT
  W
  CAAAGGAATC TGTTGAAGAG GCAAAGGTTC TTTCAATACA GCCACATTCT TGCAAGGACT
  GGAGAAAAAG CACCTGTGGT TGGCCAGGGA CTTGGCTCA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss51809768	NES14772869	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	T	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs38868611					SNP	A	A	A	A	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51809768	NES14772869	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108728847 () rs orientation: forward

Symbol	Name	Function Class
Rr636193	regulatory region 636193	831 bp proximal