rs38813266 SNP Detail

Summary

• ID
  rs38813266
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:129094822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCTAGGA AGGAAAGGCC
  TTCCCAGATC AGCCATTCAT CTTTACCCAG GTAATAGTAG AACAAGAGAA GATAGATACA
  TTTCTCATAC ATTTCTTACT AATGTCTCAC CATCTATTGC ACCTTTACAA TGCGCAATTG
  TGGCCCAGGA GTCTTTCAGT GAATGACAGC ATCATTCTGT TGTGTGACGC TGTACTTGGT
  R
  AGACGAACAC AGAAAAGGAG ACAACTGGTC GACCCAAATT TCAGAGTCCC ACTTTTCCTA
  ATGGAGAATC AGCCTGGGTA GAAAGCTAGA ATTTATAAAG GAAAGTCCTT GAACGCCAGT
  TTCCCAGACC ATGGGACTTT GGGGCAACAG CCATGGTGTG ATGACAGGTG TGTTCAAGGG
  TGAGTCAGGT GACAGGGTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51623768	NES14656467	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38813266					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51623768	NES14656467	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129094822 () rs orientation: forward

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	Intron
Rr584984	regulatory region 584984	1000 bp distal
Rr584985	regulatory region 584985	1098 bp distal