rs38796708 SNP Detail

Summary

• ID
  rs38796708
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:162001327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGTATAGTT CTTATGTCCA GTTGACATAT TAGAGACATG
  TATTTCATTC AAAATTCATT GAAATATCCT AGTCATGGTG TTAAATAACA GGGATGTAAG
  R
  GTTGGAAACA TGATCTGTAC TTGAAAGAGA AGTTTAGTAG AAGGGAAATA TATTAAGTAC
  AAAGTATGAA ATATGGTATG TAAAAATAGA CAAATCTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51400452	NES14462550	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	G	A	A	G	A	A	G	A	A	A	A
ss145930476	ENSMUSSNP7118830	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38796708					SNP	A	A	A	A	G	A	A	G	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51400452	NES14462550	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162001327 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnm3	dynamin 3			Intron
				Noncoding-Transcript-Variant
Rr421925	regulatory region 421925			647 bp distal