rs387437744 SNP Detail

Summary

• ID
  rs387437744
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  138
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:43889484 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTC TCTCTCTCTC TCTCTCTCTC
  Y
  CTCTCTCTCT CTCTCTCTCT CTCCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CZECHII/EiJ	FVB/NJ	I/LnJ	PWK/PhJ	RF/J	SM/J	ST/bJ	WSB/EiJ	ZALENDE/EiJ
ss642172736	FVB_NJ_9_43786270	EVA_MGPV3	EVA_MGPV3	f	SNP	T	C	T	C	C	C	C	C	C	C	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CZECHII/EiJ	FVB/NJ	I/LnJ	PWK/PhJ	RF/J	SM/J	ST/bJ	WSB/EiJ	ZALENDE/EiJ
rs387437744					SNP	T	C	T	C	C	C	C	C	C	C	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss642172736	FVB_NJ_9_43786270	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:43889484 () rs orientation: forward

Symbol	Name	Function Class
Gm10688	predicted gene 10688	771 bp downstream