rs38357284 SNP Detail

Summary

• ID
  rs38357284
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131506988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACAGACAC ACACACAAAC
  ATACACACAT GCATGCACAC ACACATTCAA GAATACAGAC ACACACACAC ACACATGCAC
  ATACACAGGC ACACAGACAT ACACATGAAT GCACACGCAC ACTCACACAT ACAAGAATTC
  TCCAGTAAAT CAAAAGCTTC AGTTTTCTTT TAAACAAATC TTTTACCAGT GGAGCTCATC
  R
  CCTCTTTCTT TCATGCCCAT TATGTGGTAC GTATGTAAAG TACAAGCAGA TAGCAGAAGG
  AAGGACGGGG AGGCAAAAGA ACCAGGTGAA TGAGTGCTGC AGTCGGTGCA TCAGAAACCC
  AGCTCTTCTG TAGTGTGCCA AGAATATCTC ATCTGTGTCT CGATACCAGC TGCTGTCTAG
  TCTTATAGAA GTTCTTATAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51638870	NES14654093	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38357284					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51638870	NES14654093	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131506988 () rs orientation: forward

Symbol	Name	Function Class
Rr375748	regulatory region 375748	within coordinates
Rr585381	regulatory region 585381	1713 bp proximal