TTCTCAGTCC AAAAAGAAAA ATGTTTTCTT TTAGGAATTT TTTTAATTAA ACATTTGTAT CCTACTGGTC TATGAGCTGA CCATCTAGTG TCCTTCTCCA CAAAAGAACT TTAAAGAGCT TCTTTGGGAA AAACCCAATT TGAAACAGCT TCAAATGGCC AAAGACTAAT TAAACGCTAT CAGATAAAAA TACATGAATG Y ATAATGAAAT TTTGACAATA AATCAATTTG TCATCAGTGA ACCAACTCTT TAATATGAAA ATGAGACTTT TCTGTGTGCT GTGCTGAGAT TGGCTGAGTA TCTGGTACTG GGAATACAAT CATCAAATAT ATGTGCTGAT GGTACTGGAA GACAGGGGTG GGGAAGGAGA GGGGGTGGTC TGAGAAGTAA CTGGGTCTGA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | AKR/J |
CAST/EiJ |
FVB/NJ |
NOD/ShiLtJ |
PWD/PhJ |
---|---|---|---|---|---|---|---|---|---|---|
ss51448614 | NES14439941 | PERLEGEN | MM_PANEL2 | f | SNP | T | C | T | T | C |
SNP Consensus Information | ||||||||||
SNP | Consensus Type | AKR/J |
CAST/EiJ |
FVB/NJ |
NOD/ShiLtJ |
PWD/PhJ |
||||
rs38311027 | SNP | T | C | T | T | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51448614 | NES14439941 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr3:30778202 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr374761 | regulatory region 374761 | within coordinates | ||||||
Rr574818 | regulatory region 574818 | 1394 bp distal | ||||||
Rr574819 | regulatory region 574819 | 1660 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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