rs38296867 SNP Detail

Summary

• ID
  rs38296867
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147158992 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAGGCGGT GGTTCAAAGT
  AAAGGGAGGA GTCCTTGCAG TACCCTAGTG GGTAATGGGA AGGAGGAAAG GGGCTTTGGG
  TTGGTTGGAA ACCTTGAGTT CCCTCTGGAG TTGATCACCT CAGCCATTTA TCACTCCCCA
  TTTTGAGAGA GAAAAATAAA GTGTCAAACA TTTATGCTAA CTTCCACTAG AAGCTCAACC
  S
  TTTGCACCAC CAGCCTCCTA GGTTGTGTGC CAGCTGACAA GGCTGACCAC CGAGAGCCCA
  GAATAAATAA GGAGCTGGTC TCTACTTCCC CGCACTGTTC TCAGAATGCA CCAGACTTGT
  GTGGCTGGCT TTTTGACATT TCTTTAGAGC AACTTTGGAT ATTTAACCCC TCATCCACAT
  TCTTGTACCT CATACATTTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51047038	NES13892235	PERLEGEN	MM_PANEL2	f	SNP	G	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs38296867					SNP	G	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51047038	NES13892235	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147158992 () rs orientation: forward

Symbol	Name	Function Class
Rr587151	regulatory region 587151	927 bp distal
Rr587152	regulatory region 587152	1974 bp proximal