rs37989362 SNP Detail

Summary

• ID
  rs37989362
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:8830751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTGAACAA CTTCCAGGAT
  GTATCTCTAT GGGGAATAGA AAGGTATTAG ACATTTTGTT GCAGAGACTT GAGTGTAAGT
  CCTGAAGGTG GGAAGGACAG AGAGAATCAA ATTCTTGTTG GAATACTTAA GTGAGCTCAC
  TGATACAAGA GACCTGTTGG AGATAATATG AACTTGTGTA AATGGAGGAC ACCTTCCTGG
  M
  CTATAACAGA AATGAATGAA AGGTTAGGGA CAGAGTACAA CAGGTCATCT TTTTAAGTAA
  TAGAGAAACT AGAAACCAAT CTCAGGTATG CCTGCCCATT CAATGAGCAA CTCATCTGAG
  ATTTCACAAG GATAAACTGC ATTCAGGGAC CACTGCATCA TTGTCACCTA TATAAAAAAA
  AAAAGTTTTA AATAGACTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51546759	NES14862702	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37989362					SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51546759	NES14862702	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8830751 () rs orientation: forward

Symbol	Name	Function Class
Rr626446	regulatory region 626446	496 bp proximal
Rr626447	regulatory region 626447	654 bp proximal