rs37931324 SNP Detail

Summary

• ID
  rs37931324
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83576743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGTACAC AGTGTGAGGG
  ATCTGGTCTG AGCTGTAGAC ATCCTGCCCT CAGTTACCAG CTGAGGATAT CCTGAAACTT
  CAGAGCTGTG GAGGCTGAGG GGTCATTTGA AAGTTTTCCC TGCCTGGGTC AATGGTTAGT
  TTTACAACTT TGCCCAAGGG TGTTGACGAA TCCCTTACTC CTTTCCACTG TCTGCTCCCC
  W
  CTCCAGATTG CAAGTCTGTC CTTTATCTCC ATAACTAAGG AATAGCTGAA GCCAGGTGTG
  ACCAGACCCA CTTTTCCCCT TCTTAGCATT CATCAAATCC TTTGTTTTAT CTCCATAAGT
  ATGCAATAGC CAACACCCCT GGATGGCTAG ACTGTCCTCG TCCCTCCCCG GACTTCAGTT
  AAGTCCTGCG TTTATCTCCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51353381	NES13744269	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37931324					SNP	A	A	A	A	A	A	A	T	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51353381	NES13744269	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83576743 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17607	CpG island 17607	480 bp distal
Gm7424	predicted gene 7424	1046 bp downstream
Rr632898	regulatory region 632898	1358 bp distal
Rr632899	regulatory region 632899	173 bp distal
Rr632900	regulatory region 632900	899 bp distal
Rr632901	regulatory region 632901	within coordinates