rs37904976 SNP Detail

Summary

• ID
  rs37904976
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131229650 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCGGAACT GATTTTTTTC
  CATTATAAAA TTACATATAT ACATAATATT TCTCATTTGA CAGTTACAAT GTTCTAAGGA
  CTTTGCAAAT ATGTTATGGG CGTTCATAGT AGTCTGGGAG GTCGATATCA TTGCTACTCT
  TTGGATGAAG AAACCAAGCT CTAGAGAAAA TGTGACTGAC GTCATGCATC TATTCCATAC
  R
  GTGCCAAGGC TCGTAGCGTA TGTGTTTGGC AGCGAGATCC ATTCACTTAA GTATTTGTTT
  ATACACTTTA GCAAGTGTTC TTCAGAAAAG TATAGGCTGT CATAACAGCC TCTGACGGGA
  TAACTGATCT AATTTTAGGA GAAGAAATTC AATTAGGCTT CTAGTTAGAT ACACACTGTA
  GCCATTAGTG TCAAATGTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51641669	NES14657528	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37904976					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51641669	NES14657528	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131229650 () rs orientation: forward

Symbol	Name	Function Class
Rr585360	regulatory region 585360	1283 bp distal
Rr585361	regulatory region 585361	988 bp proximal
Rr585362	regulatory region 585362	1081 bp proximal