rs37893146 SNP Detail

Summary

• ID
  rs37893146
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90754343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAAGCTTA GATGAGTGAC
  ATTACACCAC ACCGCCGAAT GCTGAGAGCC CCGGAGGCAA CTCCACACCA CTGACACACC
  TCTTCGTCTC ACTCTTCCTC TTAGCTTTTA CAATAAAAAC ATCACAAGGC TTCTAATACT
  CTGCTTAGCA AGAATATGGA GCTAATGTTC ACCCACATGC TGTCACAACC TCTTTAGAAA
  R
  TGACCTTGCT AAGCCCAGGA GAATTGAAGG CTCTCACACA CTACCCTGTA CACATCCACA
  GGAATGCCAC AGCTCAAGAG CTAGGAAGCA CAAGAAAGAA TGAATCACTG CCCTGACTAT
  AACTTTGAAC ATGCAGCTAT TTATGTAACG GAATCCAATA CACCAACACA GATGAATGGA
  GGAGGACCAT GCACAGCAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51360267	NES13739338	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37893146					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51360267	NES13739338	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90754343 () rs orientation: forward

Symbol	Name	Function Class
E130314K07Rik	RIKEN cDNA E130314K07 gene	381 bp downstream
Iqsec1	IQ motif and Sec7 domain 1	Intron
Rr634323	regulatory region 634323	1489 bp proximal