rs37877585 SNP Detail

Summary

• ID
  rs37877585
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:65946974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAGAAAAT ATCTAATAAT
  AAAAAAGAGA ATTCTCTGAT TAGACCTGTA CCTCATTTTT TTAGATTGGG TTGTTTCCTC
  GAGTTCTTTA TATATTTTGG AGATTAGCCC TCTATTGGAT GTGCTCTTTT GAGACCCTCA
  GGACCCTGCT GCAGATAGCT TGGAGGCTCC TTTCTCCACG GCCTATGTCC ACTAGTCAAC
  R
  CACATTTGTA ACCTACAGTG CGGTACCTTG ATTTATGCAC AATCACACAT ATTTTCTTAC
  ATTAATCCCC CTCCCCTAGT GAGCTTTTTC TCTGGTCTTG GGCAGGTGGG AGTGTCTTGG
  GCTGGGAGAA AGCAAGTGAC CCGTGCTCAG TTCAGACACT CTCATTATCT ACAGCTGGAC
  TTTCGGAGCC CAAGCAATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51539468	NES14688479	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37877585					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51539468	NES14688479	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65946974 () rs orientation: forward

Symbol	Name	Function Class
Rr577786	regulatory region 577786	1257 bp proximal