rs37875793 SNP Detail

Summary

• ID
  rs37875793
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130859833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCCCTCTG TTCCTCCCAG
  GAAGCCAGCA TCTAAGTGCT TGCTAACATA CAATTGTTTT CAAACTGTTG GATTTTTTTT
  TTAATGTAAA TAGATGGTAG GACGTGTTTT AAAGTTGGCT TTAAGTATCT CTGGGTAGAA
  GAGAAATAGA AGGCAGCTAA ATAGGTAGGA CACCTTTACC GTGAACCCGC TTTATAAACC
  R
  CCATTCATTT TGCCTTGATA ATCTGGTCCT CCATTGTAAC TGAATCCTAA TTCCTTTTAA
  CTTTCCTCAT TCGGGTATGT TCTGCCTGCA GCCACTTCAG CACCCCACGC CTTTCAAGCA
  TGTTTAATGG GAAAGGTGAG GGTTTTCTAC AGCTAATTAC TTAATAGGTA ACAAAGCATA
  GCTCTGCCAG GGAGGGCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51635555	NES14652435	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37875793					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51635555	NES14652435	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130859833 () rs orientation: forward

Symbol	Name	Function Class
Gm65588	predicted gene, 65588	1694 bp upstream
Rr585259	regulatory region 585259	700 bp distal
Rr585260	regulatory region 585260	1021 bp distal
Rr585261	regulatory region 585261	958 bp distal