rs37857667 SNP Detail

Summary

• ID
  rs37857667
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143854911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAAAACTG ATAGGATGCG
  TGATCTTTTC CATAATTATC ATTAAGCCTT CTGTGGGGTT GTCTAAAGGC TGACTCTAAC
  AATACCCTAC AAATCTAAAG GTGAAGTCTT TATAACCACA TCTATATTTT CATTTCTGGC
  CTAGTCTCTT CCCTCCTCAA GGGTTCCACC TAGCCATCTC TTATTTCTGC TCCTGTTTAG
  R
  TTGCCTGCTG CCCGGCTGCT GTCCACTGTC ATGCAGGTCC TTCTCTTCTG CCCTTCTAGG
  TTAGAGCCAC CGTCCCCACA TCCCATGGGA CACTAGTTAC ATTTCTCATT GCCGTGGTCA
  TTACTAACAA GAAGCAAAGT GAGAAAAGGA AGATCTTTTG GAGCCTGTGG TTTGAGGGTA
  CAATTCATCA TGATGGGGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51656045	NES14644052	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37857667					SNP	G	G	G	G	G	G	G	G	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51656045	NES14644052	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143854911 () rs orientation: forward

Symbol	Name	Function Class
Rr586587	regulatory region 586587	1715 bp distal