rs37852433 SNP Detail

Summary

• ID
  rs37852433
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57521998 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTATTTCT ATGTAAACAC
  ATAACAATAG AAAAGTACAA ATAATATTAG GAAAAACTGT TGTTTTGAAA TCTGGAGTGC
  TAGAAGCCTA TGGGTTTTTA ACTTGTTGGA AATAACAACT AGCTTTGTAA ACTCACTAGT
  CTATTCTGGG TCTCGTGCAA ATGACCCTTT GGAATCTGAA GGTAACAGTG TAAGAGATGA
  Y
  GAAAGGCATG TTTGTGGCTG GTTGTCAAGC AACCAAAGGC AGAAGTTACT GGCATGTACT
  CCTTTATTTT GTACATGGAG TGGGTGTAGG TGCTTAACTG TGTTTCTATT GGTTGCATTC
  TCTTCCAATA GCAGAAAAGA AAAGTGTTAT TTTCCCAGCT AATTAGCATA CTCTGGGAAA
  GAAACCAACT ATGTTTCATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ
ss51315051	NES13763336	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ
rs37852433					SNP	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51315051	NES13763336	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57521998 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr631144	regulatory region 631144	1125 bp distal
Rr631145	regulatory region 631145	within coordinates