rs37839159 SNP Detail

Summary

• ID
  rs37839159
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101468441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCATAAGC AGGGAGCAGA
  AAGGAGCCAA CCGAGCCAGG CATCCAGCAA ACGCAGTAGG AACTGTGCCA GGGCCTCTTG
  GGCACTCCTA CCCTCTGCTC TGTCTGTTGT TTGCGCTTGT GCACTCCTAA GTTGCTATAC
  CCAGGAAACT GCACACACAA GTCTAAGCAC TGCTCAGACA ATGCAAAAGA AGCCTAGTAC
  R
  AGCCCACAGT TCAGTCTCTG CAAGCCAGCC CTGCTAGCCA AGGGAGCCCT GTAGCCTCTA
  GGTAAAAGGG GGGGAGTTCT GAGTTAGCTT CCTGTAAACA GCTGACTTTT GGGCCTGCTT
  AGGTCAGTTG CTCCATTCTC CAGCAAACAG GACTTTAGAG TAAGAGAAGG AAACACTGAC
  GCATCTATTC TGCTGTGCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51584006	NES14669541	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37839159					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51584006	NES14669541	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101468441 () rs orientation: forward

Symbol	Name	Function Class
Rr582081	regulatory region 582081	within coordinates
Rr582082	regulatory region 582082	1458 bp proximal