rs37804958 SNP Detail

Summary

• ID
  rs37804958
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101468272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCGCTGTA AATACGAAGA
  GAGAAATAAA CATACAGAAT TGAGCATTTA TCCAGGACTT GGGCAATGGC ATCCATTCCA
  CCTTTCCCAC AATAATACGT AGGTTGCCCT GCAGTTGACA AGGATTTTTC GCAGCTGCTT
  ATTATGAATG TAAGGAAACA GAAGGCCTAC ACCATAAGCA GGGAGCAGAA AGGAGCCAAC
  Y
  GAGCCAGGCA TCCAGCAAAC GCAGTAGGAA CTGTGCCAGG GCCTCTTGGG CACTCCTACC
  CTCTGCTCTG TCTGTTGTTT GCGCTTGTGC ACTCCTAAGT TGCTATACCC AGGAAACTGC
  ACACACAAGT CTAAGCACTG CTCAGACAAT GCAAAAGAAG CCTAGTACAA GCCCACAGTT
  CAGTCTCTGC AAGCCAGCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51584018	NES14669531	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37804958					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51584018	NES14669531	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101468272 () rs orientation: forward

Symbol	Name	Function Class
Rr582081	regulatory region 582081	within coordinates
Rr582082	regulatory region 582082	1627 bp proximal