rs37764941 SNP Detail

Summary

• ID
  rs37764941
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83576563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGGGCTGCC CCCCAGAGTT
  CTTAGCGCAT CCACTCCGCA TCCCATAGTC TCAGGTCTGT CCCAACCGGG CTCTGTCTGT
  GGATCTCCGG CCAGTGCGGA AGAGCGCAGT GGGCACAAAG TGCTGTTTGT ATTGAGTCGT
  CCTAGGATCT TAGAGATCTG CAATCCTCGA GTTGCTATTT AGATGTACAC AGTGTGAGGG
  R
  TCTGGTCTGA GCTGTAGACA TCCTGCCCTC AGTTACCAGC TGAGGATATC CTGAAACTTC
  AGAGCTGTGG AGGCTGAGGG GTCATTTGAA AGTTTTCCCT GCCTGGGTCA ATGGTTAGTT
  TTACAACTTT GCCCAAGGGT GTTGACGAAT CCCTTACTCC TTTCCACTGT CTGCTCCCCA
  CTCCAGATTG CAAGTCTGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51353387	NES13744266	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A	G	A	G		G	A	A	G		A
ss321844686	CHEV_6_83549575	CHEVERUD	SCREENING_POP	f	SNP										G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37764941					SNP	A	A	G	A	A	A	G	A	G	G	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51353387	NES13744266	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83576563 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17607	CpG island 17607	300 bp distal
Gm7424	predicted gene 7424	1226 bp downstream
Rr632898	regulatory region 632898	1178 bp distal
Rr632899	regulatory region 632899	within coordinates
Rr632900	regulatory region 632900	719 bp distal
Rr632901	regulatory region 632901	159 bp proximal