rs37731709 SNP Detail

Summary

• ID
  rs37731709
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:98080536 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCTTTCCT TTTCTCCTCT
  CTTTGAGAAC AGATGAACTT TCTACAGTAT CTGCATAGGA TCATTATTCT ACATGAATTG
  TATCTCCCCA CTCAATGCAA CTTTGTGAAC ATTTCTGTGT TCTCTCTCTC TCTCTCTCTC
  TCTCTGTGCT TTTTTTCCAA CCTGCCTACA GATGGGTTTC CTGTGATTGC CTTGAACCAC
  R
  AAGACACTTT CATAGGGTTT CTTGCTCTTC TTTAATATGC AGAGGTGCAT AGTCCCAGTG
  GCAGCAGCCA CGAGTACCTT GACAGTCAGC CCTTCTCATG ATGCCCATCG GTGTTCTTCC
  TTTATCGAGT TCAGATCTGT GGGCTTCCTC CAGAAACACA GCCACAATTG AGTTGCTTAG
  CACTGTATTG GTCTGTTTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss51380901	NES13737588	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs37731709					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51380901	NES13737588	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:98080536 () rs orientation: forward

Symbol	Name	Function Class
Rr379828	regulatory region 379828	111 bp downstream
Rr635261	regulatory region 635261	1049 bp proximal
Rr635262	regulatory region 635262	1711 bp proximal
Rr635263	regulatory region 635263	1837 bp proximal