rs37730703 SNP Detail

Summary

• ID
  rs37730703
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57520133 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACTTGAA ATCATGGAAG
  TTTTCCTCTG TGTTGACGCT CCTCTTTGTA GACTGGATAC TGGTCAGAAC TTACCAGGTG
  GTGTCTCCAT GGATTCCCTA AACAAGAGAA AAGATGAGTC CTCACAGTAA TCATGTTTTT
  AGAGATGCCT CACGGGCCCT GGCACCCACT TTACCTTGGA CAGTGAGAGG GAAATATTTT
  Y
  TCTTGTAATC CCTCTGAGTA TATTAACATA GCCTCTAAGT ATGGATATGG AGGACACAAT
  TTGGTAAAAC TTTTACTCTT AACTACTGTG TAATATTTAG ATAAAACTTA AGCGAAAACA
  AAGCATTTAA GTTTTGGTCA AACATTTTTG TTCTTTAGTC GGGCCTTATA GATATTATGA
  AGAGTAGAAC AAGAACTCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss51315065	NES13763373	PERLEGEN	MM_PANEL2	f	SNP		C	C	T	T	T
ss133241505	ENSMUSSNP4349824	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs37730703					SNP	C	C	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51315065	NES13763373	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57520133 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr379418	regulatory region 379418	824 bp downstream
Rr631143	regulatory region 631143	1717 bp distal
Rr631144	regulatory region 631144	515 bp proximal
Rr631145	regulatory region 631145	1496 bp proximal