rs37719052 SNP Detail

Summary

• ID
  rs37719052
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:82960800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGC TAGTCCTATC AGAGTCTCTT
  R
  AGCAGATTGG AATCTGTAAA GGAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50989846	NES13925175	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	A	G	G	A		A	A	A		A
ss320820922	CHEV_3_82857415	CHEVERUD	SCREENING_POP	f	SNP								A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37719052					SNP	G	G	A	A	G	G	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50989846	NES13925175	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:82960800 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13295	CpG island 13295	1552 bp proximal
Rr397732	regulatory region 397732	1756 bp upstream
Rr578826	regulatory region 578826	5 bp proximal
Rr578827	regulatory region 578827	404 bp proximal
Rr578828	regulatory region 578828	1539 bp proximal
Rr578829	regulatory region 578829	1948 bp proximal