rs37718101 SNP Detail

Summary

• ID
  rs37718101
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17000197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGCACAAT AGCCCAAATC
  ATATTAAGCA CAGGGCAGAG CCAGAAGGGA AGAAGTGCCA GAGGAGACAG GAAGTGAAGG
  GCCTTCAGGT GCACCTCCTT AGCCTGGTAT TTTATAAGGC TTTATGGATC GACTGATGCT
  CTGGCTGTGG ACAAAGTGAG TTGGTACAAA GTCTCTATAG ATACCATTTA CCTGAATATT
  Y
  GGATTATTAA CCTTAAGTGT GCATAGGTAA AGAATGCAGG ATAGCATGTT GTGCATACAT
  TTACTTTAAA GTTGTGTGTT TTACTACTGC AAATTAAATT GTAAGTCAAA CTAACCAGGA
  AGACACGTTG ATTCTAAAAC TTTGATCTGA AGATTTTATT ACTGCTTGGG TTTTTGAGGG
  GCAAGGTTAT TATATTAGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss51242905	NES13805265	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T		C	T	T	C
ss321753152	CHEV_6_16950198	CHEVERUD	SCREENING_POP	f	SNP											C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs37718101					SNP	T	T	T	T	T	T	C	T	T	T	C	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51242905	NES13805265	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17000197 () rs orientation: forward

Symbol	Name	Function Class
Gm67154	predicted gene, 67154	within coordinates
Rr626743	regulatory region 626743	167 bp distal
Rr626744	regulatory region 626744	647 bp distal