rs37695087 SNP Detail

Summary

• ID
  rs37695087
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86771110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCAGCAG TTGCACGCCT
  CCCTTAAAGA AGACAGATGC AATCCTCAAA GTCAGGGGAA GGGTTCTCGG AGACAGGTAC
  AGGTCACCGT TGGGACCGGG GTTAGAAGCA ACTCTGGGTT TCCCACTAAA CTTCCAACTG
  AAGCATTTCT TGGTTGCTAG CCAGCCTGGT TCTGGCTCCT TGCTGGACAC GGAGGCACAT
  R
  CCTCTTGCTA CAAGGATAAT GAATGCTTGA AGAACAGAGG CAGGTGCAGG CAACAGAGGC
  TCCACAGGCA ACCTCCAATT TCATTTAACA AAGAATGGGT CGCTTTGGGC AGTGTTTGCT
  CTCTAGCCAA CCAAAACCTA GGTGGTCATT ATTTTAAATT GTATCAGCAA CTGTAGCTAG
  AGGAGGTGGC TTATTGTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51749416	NES14799921	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37695087					SNP	G	G	G	G	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51749416	NES14799921	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86771110 () rs orientation: forward

Symbol	Name	Function Class
Anxa4	annexin A4	544 bp upstream
Cpgi17670	CpG island 17670	255 bp distal
Rr633515	regulatory region 633515	555 bp distal
Rr633516	regulatory region 633516	54 bp distal
Rr633517	regulatory region 633517	838 bp proximal
Tssr61864	transcription start site region 61864	546 bp upstream
Tssr61865	transcription start site region 61865	527 bp upstream
Tssr61866	transcription start site region 61866	1564 bp downstream