rs37689858 SNP Detail

Summary

• ID
  rs37689858
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143220425 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCATCTTCT AAGTATCTAC
  GAGCACGTGA GCATCAGATC AACATTTGCT TTCAGGATAC AACTATAGAC ATTTTTGGTG
  ACCATGGTAT TTACTTAGAT ACTTAGAATT TGCTAGGGCA GTAGTAGAGA TTAAAGAACA
  CATATTCAGG ACTTAGCTCA TTACCTCAAG TGACATTTTA TTAGAATTAT TTTTCTTTCA
  R
  TACCAGCTCT CCATCCTGTC CCTTACCAGG AAATAACAGA AAAAGCTATA CAAGCTAAAG
  GCCAGTTGAA GGTGTGACTG GTAAATAAAC ACAAAGTCAC ATCACATGTA GAAAAATGAA
  TATTTCCAAA ACAGTTCTTT TAATGAGTAT AATTCAATGC TTTTTGGGCT TAGTTTGAGT
  AGCTGAATAT CGAAGGTAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51665390	NES14649473	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37689858					SNP	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51665390	NES14649473	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143220425 () rs orientation: forward

Symbol	Name	Function Class
Rr586538	regulatory region 586538	1550 bp distal