rs37681976 SNP Detail

Summary

• ID
  rs37681976
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:78877678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTATACTT TTTGATACAA
  AGGCTGAAAG GCTTGGAGTT CACTTTGTCT TTCTGTTTTT ATTATATATG AAAATGGCAG
  CACATAAGTA GACTTAGAAC TACATGATAA AAGTACTCTA GTATGTCTGC TTAATGTTCC
  TGGGTATTAT CTCTGTCCAT CAATTTGTAA GGCCTCAGGT GAAAATAAAT ATGCTGTAAA
  W
  TCTTCTGTAA TGGGATTCAC AAGCTTTGCT TACAGGTAGC AAGAGAAACA TGCCCAAATA
  TTTTGTACTT TTGGAACATA GGTATGACAA GAAGAAAACT TAGTTCAGAA TCAGTACTGA
  ATAGCTATGA ATAGGGTGGA GTCTTTTTTA AATGTACAGA TCTGACTTTT AAATTTATGT
  GTACATATGC ATATTTAGGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51711157	NES14810524	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	A	A	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37681976					SNP	T	T	T	T	T	T	T	T	A	A	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51711157	NES14810524	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:78877678 () rs orientation: forward

Symbol	Name	Function Class
Rr632520	regulatory region 632520	461 bp distal
Rr632521	regulatory region 632521	539 bp distal