rs37681548 SNP Detail

Summary

• ID
  rs37681548
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143449653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACTGAAAT GTCTTGATTT
  TTTCTTTTTC ACTTTTGTAT ACTACCGCAA TTTCTTGAAA ATCAAATGGC AGAACCTAAA
  CAGAGGACTT TTCCATTGCC AAAAACGCAT GCCTGCTCGG GGAGAGTGTG TGGGGATTCA
  TCCAGCATGC TTCGAGAGCT TCCAGTGTAG CCTGGGAGAA CTCCGTTTTA CCTTCTGTTC
  Y
  GATTCCTGAG TTCTGCCAGA CTTTTGTTTG GGAAGAATCT TTATGCAGCC TCGCATTTGC
  TGTGTCGTAG CAGAGCAAGC TTTCTACACT GGATCCTACT TTTAATTTGG GTGAAAGGAC
  CATCCTTAGC TTTTTGGTAG GAGAGACCAA AAGAACTCAA GGCAGGTAGC AGTCAGTTTA
  GGGTACAAGA CATTCTTATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51661364	NES14645661	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37681548					SNP	T	T	T	T	T	T	C	T	T	T	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51661364	NES14645661	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143449653 () rs orientation: forward

Symbol	Name	Function Class
Gm33867	predicted gene, 33867	within coordinates
Gm42705	predicted gene 42705	within coordinates
Rr586558	regulatory region 586558	505 bp distal
Rr586559	regulatory region 586559	895 bp distal
Rr586560	regulatory region 586560	within coordinates