rs37673992 SNP Detail

Summary

• ID
  rs37673992
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:65734990 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACATCTTTT GCTAACTCTT
  TACTCATCTG TCTAGTTTCC ACATCTTGTC TACTGAACCT CCATCACTTC AGGTGCCCAC
  CCCTTCCTCC CCGACGCAGC TGGCTGGACA CCCACTTTCC TGAGTTCTCT CTGGTTAGAG
  CTGGCACAAA CTGTGTCCTC TATCATCTTG TGACTGGGCA GGACCTCGTG TAAACCATGA
  R
  CAAGACCATC TGTGCCTCTT CTTCAATGAA GCCTTCTCTC CTGGCATCCC CCACCTCTGC
  CCCGCTCTGC CAAATACAGC TGATTCGGAA ACTCCACAGC CAGGATTCTC ACCTTCACAA
  TAATCAGGCC ACTCAGCAAA GCCTTCTCTT GCTTCTTCTC TGTGTTTGCA ACTCAAAATA
  CTCAGCTGTT TCTAAGGGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50963780	NES13941980	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37673992					SNP	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50963780	NES13941980	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65734990 () rs orientation: forward

Symbol	Name	Function Class
Gm37359	predicted gene, 37359	1547 bp downstream
Lekr1	leucine, glutamate and lysine rich 1	Intron
Rr577737	regulatory region 577737	443 bp proximal
Rr577738	regulatory region 577738	1683 bp proximal