rs37658671 SNP Detail

Summary

• ID
  rs37658671
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:112184809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGAGATGA TGGGTTCCAG
  TCACGGGGTT GGCTGTTCAA ATGCAACTCT GGTATACAAG CACCTGTATC TTCAGTATCT
  CCCTAGGACG GCACAATTGC TACCCCAGCT TTACAGCTAA TCCAGAGATG TGAAAGACTG
  TTTCTTGCTC AGTGCCATGC AGGTAGAAAG TGGCCAACCT TGGATTGAGT CCATATTACT
  Y
  GCACCTACAT CATGACACAT ATCCCAGAGA TATGACTGAA AGCCACTGGG CCACCAAGCC
  CACAAGTCAC CATAACAAAT ACAAGCATCT CTTTTCATCC CTACATCCCA TTATCCTAAC
  CATCAATTTT ACAAGAGCAG ATTCTAACAG CTAGTGGAGG AAAAATGCTA CTTCCCCAAG
  AAGCAAAAGA TATTAACAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51832926	NES14763427	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37658671					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51832926	NES14763427	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:112184809 () rs orientation: forward

Symbol	Name	Function Class
Gm66265	predicted gene, 66265	996 bp upstream
Rr636305	regulatory region 636305	251 bp distal
Rr636306	regulatory region 636306	399 bp distal
Rr636307	regulatory region 636307	1060 bp proximal
Rr636308	regulatory region 636308	1112 bp proximal