rs37650225 SNP Detail

Summary

• ID
  rs37650225
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:66310979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATCCTGAC ACTGCCAGAG
  ATTCTTCAAA TCCTACACAG AAAGCTGAAG CTTGGTCTAA CAAACAAAAC TGGATTAAAG
  ACAGGTTTTG GCCTACTAAT AGCCTATTGT CTAGGCCAAC CTGTGAGTAC TATGATATAG
  GCACTGTATT TACCACATCA GAAAGCAGTA CGCATTCAAG ATACTGCTTT AGTAGGGAAA
  Y
  GCTCCTTGCA TCTGAACTTG GAGTACAAAA CCAATTCATT CTTTTTCAGG TCCCTGTATA
  AATCGGACAC TTTCTCCAAG GCTCTTTCCA ACCCATGAGT TCTAGAAAGG AAGAGTGGAA
  GAGCTGCTTC TGGAAAAGCC TCCATTGGCA GCCTGGAATC ATGGAGGAGA CACTTCTTCC
  TGTGGAAAGG ATGCCTCTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50970304	NES13937283	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37650225					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50970304	NES13937283	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:66310979 () rs orientation: forward

Symbol	Name	Function Class
Gm35236	predicted gene, 35236	within coordinates
Rr2055	regulatory region 2055	869 bp distal
Rr577828	regulatory region 577828	1901 bp distal