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rs37645392 SNP Detail
Summary
  • ID
    rs37645392
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr3:102242908 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GCAGTCTGTG GGGGTTTCAG
    GACACCTGGG GTCACTCACC ACTCTGGCTT GGACTGGACA GAAAGAGGGC CCATATCTTC
    AGAGTGGCTC AGTGTTCTGT ATTCTTGGAA AAACGTATGT TGGGCCCCAT CTTGGACCCT
    GGACATCTTT CCTAGATATT TTCTCATCAC CTTAGGTAGA GGGATGAAAA GAAACCTAGG
    R
    AATTCACAAC ATATTAAGCA CTAGCAGTTA TATACCAACC AATGTCCATA CATTCAAACC
    CAAGGAACCC ATCTCTAAGT TAAAATGCAA TTCCAGGGTC AAGTTCAAAC TCACTTTGGG
    ATGGACTTTC TGGGCACAGA GAGGCCCTGT TCTCAGCTGC AGGTCTTTCC ACTAAACCTC
    TACTGAACCT TCTTAGACTG                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss51585425 NES14664803 PERLEGEN MM_PANEL2 f SNP G G G G G G G G G G A G G A G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs37645392 SNP G G G G G G G G G G A G G A G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss51585425 NES14664803 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:102242908 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr582225 regulatory region 582225 94 bp distal
Rr582226 regulatory region 582226 209 bp distal
Rr582227 regulatory region 582227 162 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory