rs37624051 SNP Detail

Summary

• ID
  rs37624051
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:113358095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAGGCTAC CTTGAGTGAC
  ATTGGTCTTG TTGCCAGATG AATAGTTCCT CCTGATTTGG TTAATTCCAA AGCAGGGTCA
  TAGGGCTCCC ATTCAGAACC TATGGGAGAC CTACCCCAGA GTGTGACCTT TAGAGCAGAG
  CTCTGGGGAC GTGTCTCCAA AAGCGTGACA GCCACCGGCA GCCCCAGAAG GTCACAGGAT
  W
  TAGATCCCAG AGATGATGCC GCTAAACTTT ATTAATGTAA GGATCGAGAC TTTTTTTTAC
  TTTTGATCTT TAATATGTCT GACAACTTAG ACCTTTTTAC ACTCCATATT TTGAAAGCAG
  TCTTCTCTTG ACTGGTTTTT ATTTCATAAA TAAGTATTCT TCCTCTTTGA AATTTCACCT
  GGCAAGGAGA TGATAGAACA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51841901	NES14761442	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37624051					SNP	T	T	T	T	T	T	A	T	T	T	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51841901	NES14761442	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113358095 () rs orientation: forward

Symbol	Name	Function Class
Arpc4	actin related protein 2/3 complex, subunit 4	Intron
Rr636501	regulatory region 636501	1546 bp distal
Rr636502	regulatory region 636502	600 bp proximal
Tssr58200	transcription start site region 58200	387 bp downstream