rs37617231 SNP Detail

Summary

• ID
  rs37617231
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143419994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAGAATTG CCTGGTGTGG
  GTTGCTGGGA ACTGAACCCA AGTCCTCTGT GTAAGCTATA AGTGCACTTA ACTTTAAGCT
  GTGTCTCCAG TTTCTAACCA GGCCCTTTTA AAGCATTTTG TTCATTCGTT CTATTCCCCT
  CTTGGTTTCT AGAATGCAGC ATGCGTCTGC CAAGCCTCTC ACTTTGCCAG TTCATCTTTG
  W
  TCTGGCTCTT CTGCCTCCTG CTGTGGCGTA GATGCTATTT GTCTTCTGTA TTAGACTGAA
  CTTTGGTTCC CACTATGTTA ATGTGGAGAG GTGGGAATAC TTTAAAAACA TAGGGCCTGT
  GGGGAATGGT TATGTCAACA GGGAGGAAGG GGTGAGTTGT ATGTAATCTT AGAGAGTGAT
  TTGATCCTCT GAAAGACAGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51661952	NES14646223	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T	A	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37617231					SNP	A	A	A	A	A	T	A	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51661952	NES14646223	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143419994 () rs orientation: forward

Symbol	Name	Function Class
Rr586554	regulatory region 586554	627 bp distal