rs37616552 SNP Detail

Summary

• ID
  rs37616552
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108729511 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATGATCGG TTGTGCCTTT
  CTGCCACAAA GGACAAAATG GACACCAGAG GCAGTAGCTT CACTTGGGTC TATTACTCAG
  TGCTGAGAGA AACTCGGGCT TTTTACATAA TGTTTAGAAA TAAGCATCTG AGAAGTGTGG
  AAACATGCTG TCCTGGTTTA CTCAGCCCCA TGCTTAAATG CTGGCATTAG CACCATCCTC
  R
  GAATGTGGAA AGTTGTCTAA AAAATGAGTC ACCTGGCACC AAAAAAACAT TTATGCACAG
  ACTTCCACCC CACACCCCCC ACACTCTCCC CCTCCCCGCA ACCCATATCT TAGCATCAAC
  AAAACGGCTC TGCTGGCTTG TAAATTCTGA GAAGTCTGGG AGAACAAGGG TTCCCCCAAG
  TGGTGTGTGG TTATTCGTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss51809759	NES14772834	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs37616552					SNP	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51809759	NES14772834	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108729511 () rs orientation: forward

Symbol	Name	Function Class
Rr636193	regulatory region 636193	167 bp proximal
Rr636194	regulatory region 636194	1355 bp proximal