rs37576083 SNP Detail

Summary

• ID
  rs37576083
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57514672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGAGGCA CTTAGTTTGC
  AAGAGGTTGA ACTGGGACTA CTTGGCTATG TCTCTCTTCA TAGCCAGGCT CTCCGCTTCT
  TTCTCATGAG AGGTAAGTGT GAAGACACTG AACTCATATT CACTATGCAG TACTGCCCAG
  AGCCTTTCTC TCTAGAGCAT CTTTGATGTC TTTCCTACAC GCACTGCAGA AACAGCACCA
  Y
  CTAATTCTGA AGCATTTACA CACCCAGGCC TTTTCTTTTA TAGACTTTCT GGTGAGATTT
  GTTGCCTGTT CTGTTTTTAG GACTGATGAT GATTTTGTGC TATGTGAAGA GGTATAAATG
  TGGCCTTTGT CAGTCTGTGA TCTCAGCAGA TCTCTTTCTC TTGCAGATTG CTTTGGTATT
  TTTCAACAAG AAAAGGAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51315097	NES13763431	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37576083					SNP	C	C	C	C	T	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51315097	NES13763431	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57514672 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17484	CpG island 17484	1820 bp distal
Gm45193	predicted gene 45193	within coordinates
Rr399669	regulatory region 399669	1969 bp downstream
Rr631142	regulatory region 631142	1771 bp distal