rs37557795 SNP Detail

Summary

• ID
  rs37557795
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86769910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCCCAGAG TGCTCCTCCA
  GTAAATGGAG GCTTTCATAC CCTTGAGGTG CACATTGAGC CAGCAAAGTG TTAAACCGCC
  AATTGTCTTA GGCGCCAAAG TCTCCAACTG GTCAAAGCAC CGAGGACTAA GTTAAAATGT
  AGACACAGGC AGACACAGAA TAAAAACTAA GAATAAGATG ATTCCTGGGC GCCAGGCACT
  R
  TGTGGAGACC GTTCGCTACA AGAGAGGCGA GGAGCGCCCT AAGAAGACGA GAAAGCAAAC
  TTACTTGCAA AAAGAAAAGG CAACACAAGT AGTGCTGGAG TGAGCTTCAG AGAATGTTAA
  CTCAGTGGCT TATCCTCAGT GCGGAGTCCC GGGGGGGCTT TGACTCAGCA AAGGACTGCA
  GGAGTGCTGT GCACCGTGCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51749449	NES14799907	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37557795					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51749449	NES14799907	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86769910 () rs orientation: forward

Symbol	Name	Function Class
Anxa4	annexin A4	Intron
Cpgi17670	CpG island 17670	4 bp proximal
Rr633515	regulatory region 633515	within coordinates
Rr633516	regulatory region 633516	646 bp proximal
Tssr61864	transcription start site region 61864	594 bp downstream
Tssr61865	transcription start site region 61865	662 bp downstream