CAGCCACTGC CTTCTGAAGA TCTGGCTTCT GATTTTTCAG TCCCTGTAAC TTGCCTCTTT CTCCACAGAA GTCTTACTGC ATGGACATAT TTTTGAGCAC GAAGACTCTT TGTCTTGACT TCGTTTTTCT TCCCTGGATG GACCCTTCAT GACATCAACT CGGGAAAAAG GATCCTCTGA ACTGGCTGAG CCCTCAGTGG R TTCCATAGTG ACTGTCTTGC GTAGAACCTA TAGGCCCGTG TTAAGTGTCT AGATACGCAC CTTTCTCTTA AAACAGTTTG ATTTAGCAGG GGTCACGAGG CCCTGAGGGC TGCATTTTAA TATGTGCTTT GGGTGTAGGG TACAGACCTC GTACCTGAGA AATCCTAGTC TATGGGGTAA ACTGTTCTTC CAAGCACAGA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51616805 | NES14661499 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | G | A | G | A | G | G | G | G | G | G | A | G | |||
ss135875966 | ENSMUSSNP3072861 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A | G | ||||||||||||||
ss320958558 | CHEV_3_127652602 | CHEVERUD | SCREENING_POP | f | SNP | G | A | |||||||||||||||
SNP Consensus Information | ||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs37557020 | SNP | A | A | A | G | A | G | A | G | G | G | G | G | G | G | A | A | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51616805 | NES14661499 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr3:127743333 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
9830132P13Rik | RIKEN cDNA 9830132P13 gene | within coordinates | ||||||
Rr398010 | regulatory region 398010 | 363 bp downstream | ||||||
Rr584909 | regulatory region 584909 | 1064 bp distal | ||||||
Rr584910 | regulatory region 584910 | 265 bp distal | ||||||
Rr584911 | regulatory region 584911 | 563 bp distal | ||||||
Tssr31619 | transcription start site region 31619 | 619 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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