rs37552738 SNP Detail

Summary

• ID
  rs37552738
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147162894 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACACA CACACACACA
  CACACACACA CACACAGACA CAGACACACA CACACACAAT ACACTCATAC TCTCTCACAC
  ACACAGACAC ACACAGACAC ACACACACAG ACACACAGAC ACACACACAC ACACACACAC
  ACGCACACAC ACACACATGC ACACACACAC GCACAAAGAG TTTTATTTTA TTTCCAGAGG
  W
  TCATTTTGCA AATCTTACTG GCTGTTCATT TGAAAAGGAA CATAGTGAAG ATGTTATCTT
  AAAAACTTCC TCTGTCTTGG GCTTTGATAA ATAGATAGGC TTTTCTTAGG CACCTTCCCA
  CACTTGGGTA TAAAGTAGAA CATACCAGGC TTTTCTCTGA CTCCAGCTCC TTACATACGT
  ACGTAATTGT TTGAAAGATC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51046986	NES13892073	PERLEGEN	MM_PANEL2	f	SNP	A	A	T	A	T	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37552738					SNP	A	A	T	A	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51046986	NES13892073	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147162894 () rs orientation: forward

Symbol	Name	Function Class
Rr587152	regulatory region 587152	1298 bp distal
Rr587153	regulatory region 587153	940 bp proximal