rs37521903 SNP Detail

Summary

• ID
  rs37521903
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131508810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGATCAAA TCAGTATTGT
  TTATCGAAGC TATTATTCAC TAATCCCTCT CAACTGCGGT TTCAGTCAAT AGCGCTTTAA
  AAATGTTGAA TGGAAAATTC CAGAAATAAA CAATTCATAA GTCTTAAACT GCATGCAGTT
  TTGAGCAGCA TGATAAAATC TCGCATTGGC CTTCTCCATC CTGCCCAGGA TGTGAATCAC
  Y
  CTGCCTGTTA TTCACTCGGT CACCATGCCA CTTATCAGAT GGGCTATTCT GGTATCATGA
  TGTTTGTGCT TTTTAAAGTC ATGAAGGCCT GAGAACACTG CTGCCACAAC TCTTATCTCG
  GTACACGGTT ATATTGTTCT ATTTTTATCA TTGGTTATCA TTAACCTTTT ACTGTGCTCC
  ATTCATAAAT TAAACTTTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51638849	NES14654100	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T		C	C	T	C
ss135905472	ENSMUSSNP3763505	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37521903					SNP	C	C	C	C	C	C	T	C	C	C	T	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51638849	NES14654100	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131508810 () rs orientation: forward

Symbol	Name	Function Class
Rr375748	regulatory region 375748	544 bp downstream
Rr585381	regulatory region 585381	within coordinates