rs37509653 SNP Detail

Summary

• ID
  rs37509653
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:103284034 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTAATAGG TACCACCAGG
  GGGCAGTAAG AAACTATGCT TTCTAACTAG ACTGGCACTA TGAAGGCCCT TTGCTTCATA
  AACACAAAAG CATCATTACT AAATATCACA CAATAGGAAG ATTTTGGGGT CTCTCCGTTT
  TAAATTACTA TCACTAATGT TTAAAACAGC ATCATCACAC GGCACCATCA GCCTACATTG
  Y
  CTGACATCAT TAAAGCAGAG ACCACCAGTC TCAGCACGCT GTCTCAATCT TCTGTATGTG
  TAAGCATGCT TAAAATGCAT CAGGCACATC TATAAATGAT GATCCCCTAC ACACACACAC
  ACACACACAC ACACACACAC ACACACACAC ACACACACAG TCAAAATTAC GATGGTGGTG
  ATGAATTAAA TAGAATTTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ
ss51395999	NES13716979	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ
rs37509653					SNP	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51395999	NES13716979	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:103284034 () rs orientation: forward

Symbol	Name	Function Class
Rr635872	regulatory region 635872	within coordinates
Rr635873	regulatory region 635873	171 bp distal