rs37507623 SNP Detail

Summary

• ID
  rs37507623
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:17979441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAGGAGGG CTTTGATGAT
  TTCAGGGAGG AGCATTTGAA TCAGGGCTGC CTGAGCCCAA AGCATCCTGA GCACCTCTGT
  GTTTCTCAGC TTCTCTGTAC AGGGACCAGC AGCCCTCCAG CCAGCCCAGA CACTTTCAGG
  ATCCCCTTTC AGCCTCTTAG GATCCCCCTC CACCTGAAGT CCCAGTGATA CCCTTAAGTT
  Y
  TCCTTGGATT CCTGAGGTTG GTAGAGCTAG TAAGAGGAGC TCATCTGGCT TGGGATCTTC
  AAAGTAAACT CAGAAGTCTC AGGCAGAGAG AAGATGCTGC TGTCCAGGAA CCTCAGAGCC
  CTAGCTGCGA TCCACCTGTG GATAGTGTAC CTGCTCCTGG AGGATTTACT GGGCACCTGC
  GCAGGTGAGC ACTGAACAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	NOD/ShiLtJ
ss51883291	NES14902304	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	NOD/ShiLtJ
rs37507623					SNP	C	C	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51883291	NES14902304	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:17979441 () rs orientation: forward

Symbol	Name	Function Class
Mill1	MHC I like leukocyte 1	mRNA-UTR
Rr642879	regulatory region 642879	1348 bp distal
Tssr64734	transcription start site region 64734	300 bp downstream
Tssr64735	transcription start site region 64735	280 bp downstream
Tssr64736	transcription start site region 64736	114 bp downstream