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rs37498531 SNP Detail
Summary
  • ID
    rs37498531
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr18:77592899 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CAGAGGCCTC CTCCCCTAGG
    GAGGCTTTCC TCTCCGTCTC ACTGGATCTG TGCCACCCTG GGTTTCTGAA GACACTGTCC
    ACCCCCAACG CCTCTCCATA AGGCAGGCAG GCCTCCAGGA GGCCTTGCGA CACTGCTGAT
    GATGTAATGC CTGGGATTTT TAGATGGGTG GATCTTGTAG GATGCAAATT CCTTCCATGC
    R
    GCAGGCAGTT ACTTGATATA CCTCAAGGTT TGGAGTCCTC CGCCAGCTCC CAGCAACTGC
    TCCCTTGCTC TTAATTTTTT AAAAAAAATC CAGCTCTGAA TAACAGCTGT GACTCATTTC
    TTCCCAGGCA AGCCACCGCT GAGCTGGAGC CTCAGGTCTG AAAATGCTCT GGGCATTAGA
    GTGGATTAGC CTCTAGCCAC                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
ss50501550 NES13695664 PERLEGEN MM_PANEL2 f SNP G A A G A A
SNP Consensus Information
SNP Consensus Type
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
rs37498531 SNP G A A G A A
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss50501550 NES13695664 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr18:77592899 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C Intron
mRNA-UTR
Noncoding-Transcript-Variant
Rr541133 regulatory region 541133 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory