rs37468759 SNP Detail

Summary

• ID
  rs37468759
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:112186367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCATTCAT GGAAGTAACG
  CACCCTTGTT CCTGAAGTAA CCACAATAAA CCCACCGTTT CACTGCACTA GACTTGGGTG
  GAATACTTGC CTTGGTCAGT CATCTATGCT CTGTATGATA TGTTCTGTGT GTTTTGTCTG
  ATCCAGGAAG TAAGCAAAAA TGAGGGTACA AAGAAAACAC GGAAAGACAT GGAATGTCTA
  S
  CTAGGGCCAC ACTTGCCCAC TGAGGTGCAG GGAGAGGAAG AACAGCAGTG GTGTAAAGTG
  ACAGCAGGAT CCTACCTCTA GTATCCTCAC TCGTGCAGGC AAACACTCTT GGGGAGACCC
  CAAAATGGCC AGGATGTGAG GCCAATGCTT GTTCTGACCC TGCTCCTGTA ACAGAGAAGA
  CCTTATGATA CAGACTTGAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51832920	NES14763393	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	C	G	G	C	G	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37468759					SNP	G	G	G	G	G	C	G	G	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51832920	NES14763393	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:112186367 () rs orientation: forward

Symbol	Name	Function Class
1700054K19Rik	RIKEN cDNA 1700054K19 gene	1302 bp upstream
Rr636305	regulatory region 636305	1809 bp distal
Rr636306	regulatory region 636306	1957 bp distal
Rr636307	regulatory region 636307	464 bp distal
Rr636308	regulatory region 636308	425 bp distal
Rr636309	regulatory region 636309	787 bp proximal
Rr636310	regulatory region 636310	1288 bp proximal
Rr636311	regulatory region 636311	1748 bp proximal