rs37450339 SNP Detail

Summary

• ID
  rs37450339
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:120740419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAAGAATA ATACCAAAGA
  AACTCCAATG TCAAGTCCTA AGTCTTTGAA AAATGTATAC TTCATTTTTC TTTGCCTTGG
  AGAAAATATA GGCAAAAAGG GAATAAGGTC AAGTGCATTG TTTTTGAGAA AAATTTGGAG
  AGAACTTGGT AAATGCATTT ACTAAGTGAC AATGTTGAAG CCATAGAAAA TATTCTCTGG
  R
  TTGGTTCAGT TAGGAGGGCT TTTATCAGAG GTCAAAGCTA GGGAACCATT AACCAAGGAA
  ACAAACAAAG ACTACATGGT AAATAATAAG CAAAACAAGA AAGCCTGAAA TCCCGTAAGG
  AATATTGAAC ATAACATATA AGATGAAGTG TTCAAATATA TTATTCAGTA GTTCGAGGTT
  TTCGCATCGC TTTGGTAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51608243	NES14666145	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37450339					SNP	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51608243	NES14666145	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:120740419 () rs orientation: forward

Symbol	Name	Function Class
Rr583995	regulatory region 583995	143 bp proximal