rs37450217 SNP Detail

Summary

• ID
  rs37450217
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:145409250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTACTCTC TGTAACAATT
  GCAGGTTATT TAGAGCTTGT CCTCTCCTCA GCCTGGGAGG ATGAGAGTTG ATTTGTTGGA
  TGTACGTGCA ATCTAGAAAG AAACCCTGGG CCTGCTTCCC ATGCTTGCGA GGGGACAGTC
  TCATCCCTTT TAATGACTTC CTCCATCCCT CTCTGATCTG AACCAGTCTT GCTTAACTCC
  R
  TAATACTGCT TTACCCATTC TTCACTGGGG ACCATACAGG GTTCCAGGAA ACTCTCGGGG
  CTAAAAACAT TCCAGACATT CCTTAACACT GCCTTCCTCA AAAGGTCGGT TTCTTAGGCT
  CTTCAGAGAG AACGCTGCCC ACACAGTTCA CAGGGACCGA CGGCCGGCCG CCACACAAGC
  CCTGCATTAG CAGACAGCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51670895	NES14639741	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A	A	A	A	A	G		A	A	G	A
ss136039634	ENSMUSSNP7102078	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A						A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37450217					SNP	A	A	A	A	A	A	A	A	A	A	A	G	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51670895	NES14639741	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145409250 () rs orientation: forward

Symbol	Name	Function Class
Rr586822	regulatory region 586822	1196 bp distal
Rr586823	regulatory region 586823	within coordinates
Rr586824	regulatory region 586824	1807 bp proximal