rs37436728 SNP Detail

Summary

• ID
  rs37436728
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143417217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCATGATC AGCTTCAACC
  TTCAAGCTCT GAATCCCCCA CAGCACCGCG CAGTCCAAAC TTTCCTTGGT GCAATGAACA
  CAGGATTGGA ATAAATAGTT AATTCACTCT AGAGACTGCT TACTGAAACA ATCCAGCTTC
  CTTTCCTATT AGGGACGTGG AGCATGGGAT CGCCTGAGCA TTTCTGCGCC GCCGCCACCC
  Y
  GACAGCTACC TAATCCCTGA CCCCCCCCCC CCCCACCTCT GCAAAAGCAA AGATGAAGAA
  GGCTACAGGT AGTCCTTTGA GCCTTTGTTG ATCTGTGTAC TGACAAAGGT ACCTGGGGTG
  ACTTTAGTCT CCAGCATCTG GCGTTAGTCT CTTGAGTCAT TGCCAGAGGT ACTGCCTATG
  TGGGTTTGGC AGGGTAGGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51662006	NES14646297	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37436728					SNP	C	C	C	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51662006	NES14646297	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143417217 () rs orientation: forward

Symbol	Name	Function Class
Gm6260	predicted gene 6260	within coordinates
Rr586554	regulatory region 586554	1712 bp proximal