rs37433800 SNP Detail

Summary

• ID
  rs37433800
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:128127718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCTTTCAG GTTGGAACGA
  CTTTAATGTT TTGATAATTG GCTAAGTTGG TGCAAAGCAG CATCGGGCCT TTGTGGGGAG
  TTCAGACATG AATGGAATTC TGTTCTTCCT CCTCCATTGC TACCCTGGGT CCTGTCAAAC
  CCAGAGCCCT GCCCGTGGTA GGCAACCACG GTGGCCCTGA GCCATACCTG GGCCCTTCAG
  Y
  TCTCTCTTCC AGTTACCTCA GGTGTACTCC CTTCGCTCCT GACTCCAGTT CTATAAATTT
  CCTTCTCTTC CTATAGAGGC TGAGCGCTGT CTGCTTCAGC CCACCATGTA AAACAGAATT
  CATGCTAGCA GCTCCCTTGC CATGATCAAT TCCCCACCTA CAAAGTAATC CTGACACTCT
  CATGAAGATG TGAAGCTCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50948053	NES14141707	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37433800					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50948053	NES14141707	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128127718 () rs orientation: forward

Symbol	Name	Function Class
Stat2	signal transducer and activator of transcription 2	mRNA-UTR
Tssr96388	transcription start site region 96388	642 bp upstream