rs37432954 SNP Detail

Summary

• ID
  rs37432954
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:135870894 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAAGCAGT TTCATCATGT
  GACTTTTCTA ATAGACTTTA CTCTTGATAG GTAAGACTTC TGCTCCTTCA GCCTCGATCA
  AAGAAATTGT ACAATTGTAT AGAAACAAGC ATTACTTCCA ACCTCTGGAT GTGGAACCTC
  ATTGATGAGT TCACTCCTGG GACTGCCTTT TCTGTTCATG CCTACAGATA ATGAGGGGGA
  W
  TACTGCACAC ATGTCCGATG AGATATTAAT CTTTGAAGGT GTATAGTTCC ACCTAAATAT
  TGTTAACTTG CTTTGGCATA GTGGGCATTT TCTTGCTATG GTTGAACATT TTCAAATTTT
  AGTAGTGTTC TACATATCGA CTGTTCTTGC CTGTATCATC AGAAATCTAC TCTCTAGGAA
  GCATCTTAAG AGGCTTCAGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51642419	NES14646554	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37432954					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51642419	NES14646554	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:135870894 () rs orientation: forward

Symbol	Name	Function Class
Bank1	B cell scaffold protein with ankyrin repeats 1	Intron
Rr585808	regulatory region 585808	201 bp proximal