rs37432290 SNP Detail

Summary

• ID
  rs37432290
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:66307724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACATTTTAA ACGTACAATA
  TTTTCAACTT ACAGTGGGTT TATCAGTTGT GACCCCATTG TCAGCCGAGG AGCACCTGTA
  TTCCACAGCC TCCCTAGTGG CTCAATTATG CAGCCCGGTT TGAAAATGAT TGTGGAGGAA
  GCCTGTCAGA AGCATAGATA GATACCCAGG TCCAATCTAG ACCTACTGGA CCAGGATTTT
  Y
  ATAGGAGATC TGGGAAAGTA AATTGCTTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT
  GTGTGTGAGA GAGAGAGAGA GAGAGAGAGT TGTTTTATGT GCATATGTAC ATGAGTGTTC
  AAATACGTAT GGGTGTATGT ACATGTGTGC AGATGTATAC CCACATGTGT AGAGGCCCAA
  AGTTGCTGTC AGGTGTCTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss50970346	NES13937351	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs37432290					SNP	C	C	C	C	C	C	C	C	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50970346	NES13937351	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:66307724 () rs orientation: forward

Symbol	Name	Function Class
Gm35236	predicted gene, 35236	886 bp upstream
Rr777	regulatory region 777	622 bp distal
Rr2055	regulatory region 2055	within coordinates
Rr577825	regulatory region 577825	1199 bp distal
Rr577826	regulatory region 577826	1357 bp distal
Rr577827	regulatory region 577827	396 bp proximal
Rr577828	regulatory region 577828	897 bp proximal
Tssr29427	transcription start site region 29427	844 bp upstream