rs37427304 SNP Detail

Summary

• ID
  rs37427304
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86784469 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGAAGTGCA CAGCTTCTCA TCCCAGAGCA CAGTGTGGAG
  CTGGACAAAC CAAAGGTGTA GAAAACGCCA TATTCTAAAG CCCATGGACA GACACACTTC
  M
  GAGCTGACAC AGAAGCTGTG CTCACCTGGT GACCTGGTAT TTGCAGATGG ATGCTTCCAG
  GCTTGGAGGG GACAGTGGAG ACCAGAGTGG GGACACCTC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss51749215	NES14799571	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs37427304					SNP	A	A	A	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51749215	NES14799571	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86784469 () rs orientation: forward

Symbol	Name	Function Class
D6Dcr21	DNA Segment, Chr 6, Derry C. Roopenian 21	561 bp distal
D6Mit29	DNA segment, Chr 6, Massachusetts Institute of Technology 29	560 bp distal
Rr633520	regulatory region 633520	564 bp distal
Rr633521	regulatory region 633521	853 bp distal
Rr633522	regulatory region 633522	754 bp proximal