rs37408167 SNP Detail

Summary

• ID
  rs37408167
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86785430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTCAGAAGG TAGATGGGTC TCGGAGCTAC CTAGGGAAGA
  TGAGGTGAAG CCTTATGTCT TCCCTTCTAA TAGTAACCTT TGGGACATCA GAACTACTGG
  S
  AGGACCTCAG CAGCAGGTAA GGGTGGGACA CCCTGCTTCT CTCATGTAGA GAGCAAGCAA
  GGTCCTTCTG TGTCATTCTC AGCATGAGTT AGACATTTGG                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss51749209	NES14799547	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs37408167					SNP	G	G	G	G	G	G	G	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51749209	NES14799547	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86785430 () rs orientation: forward

Symbol	Name	Function Class
D6Dcr21	DNA Segment, Chr 6, Derry C. Roopenian 21	1522 bp distal
D6Mit29	DNA segment, Chr 6, Massachusetts Institute of Technology 29	1521 bp distal
Rr633520	regulatory region 633520	1525 bp distal
Rr633521	regulatory region 633521	1814 bp distal
Rr633522	regulatory region 633522	186 bp distal
Rr633523	regulatory region 633523	1364 bp proximal